Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_20780 | Not Available | Negative | 4565059 - 4565876 | 27847.1 |
| Trna-thr | Not Available | Not Available | Positive | 4566039 - 4566114 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4566121 - 4566195 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4566326 - 4566410 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 4566426 - 4566501 | Not Available |
| n-acetyltransferase | D5071_20805 | Not Available | Positive | 4566833 - 4567381 | 20264.3 |
| type i pantothenate kinase | D5071_20810 | Not Available | Positive | 4567593 - 4568543 | 35964.2 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | D5071_20815 | Not Available | Negative | 4568583 - 4569542 | 35142.8 |
| udp-n-acetylmuramate dehydrogenase | D5071_20820 | Not Available | Negative | 4569539 - 4570576 | 38199.0 |
| dienelactone hydrolase | D5071_20825 | Not Available | Positive | 4570932 - 4572104 | 42216.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
