Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | D5071_20730 | Not Available | Negative | 4544894 - 4545442 | 19728.9 |
| mfs transporter | D5071_20735 | Not Available | Negative | 4545670 - 4546917 | 44419.6 |
| isochorismate synthase | D5071_20740 | Not Available | Positive | 4547261 - 4548457 | 43030.4 |
| (2,3-dihydroxybenzoyl)adenylate synthase | D5071_20745 | Not Available | Positive | 4548454 - 4550079 | 59946.7 |
| isochorismatase | D5071_20750 | Not Available | Positive | 4550090 - 4550965 | 32536.9 |
| amino acid adenylation domain-containing protein | D5071_20755 | Not Available | Positive | 4550962 - 4554105 | 115499.0 |
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | D5071_20760 | Not Available | Positive | 4554111 - 4554881 | 27274.6 |
| amino acid adenylation domain-containing protein | D5071_20765 | Not Available | Positive | 4554904 - 4561257 | 235391.0 |
| amino acid adenylation domain-containing protein | D5071_20770 | Not Available | Positive | 4561254 - 4563356 | 77326.8 |
| tolc family protein | D5071_20775 | Not Available | Negative | 4563442 - 4564950 | 55879.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
