Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l15 | D5071_20630 | Not Available | Positive | 4530813 - 4531247 | 15205.6 |
| preprotein translocase subunit secy | D5071_20635 | Not Available | Positive | 4531255 - 4532586 | 48631.9 |
| 50s ribosomal protein l36 | D5071_20640 | Not Available | Positive | 4532620 - 4532736 | 4349.58 |
| 30s ribosomal protein s13 | D5071_20645 | Not Available | Positive | 4532883 - 4533239 | 13227.3 |
| 30s ribosomal protein s11 | D5071_20650 | Not Available | Positive | 4533256 - 4533645 | 13859.8 |
| 30s ribosomal protein s4 | D5071_20655 | Not Available | Positive | 4533676 - 4534296 | 23457.6 |
| dna-directed rna polymerase subunit alpha | D5071_20660 | Not Available | Positive | 4534322 - 4535311 | 36524.0 |
| 50s ribosomal protein l17 | D5071_20665 | Not Available | Positive | 4535352 - 4535744 | 14740.8 |
| alternative ribosome-rescue factor a | D5071_20670 | Not Available | Positive | 4535952 - 4536164 | 8246.93 |
| large-conductance mechanosensitive channel protein mscl | D5071_20675 | Not Available | Negative | 4536195 - 4536608 | 15152.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
