Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s17 | D5071_20580 | Not Available | Positive | 4526789 - 4527043 | 9750.08 |
| 50s ribosomal protein l14 | D5071_20585 | Not Available | Positive | 4527205 - 4527576 | 13568.9 |
| 50s ribosomal protein l24 | D5071_20590 | Not Available | Positive | 4527587 - 4527901 | 11344.9 |
| 50s ribosomal protein l5 | D5071_20595 | Not Available | Positive | 4527916 - 4528455 | 20239.7 |
| 30s ribosomal protein s14 | D5071_20600 | Not Available | Positive | 4528469 - 4528774 | 11663.2 |
| 30s ribosomal protein s8 | D5071_20605 | Not Available | Positive | 4528808 - 4529200 | 14183.5 |
| 50s ribosomal protein l6 | D5071_20610 | Not Available | Positive | 4529213 - 4529746 | 18915.0 |
| 50s ribosomal protein l18 | D5071_20615 | Not Available | Positive | 4529756 - 4530109 | 12722.3 |
| 30s ribosomal protein s5 | D5071_20620 | Not Available | Positive | 4530124 - 4530624 | 17396.3 |
| 50s ribosomal protein l30 | D5071_20625 | Not Available | Positive | 4530630 - 4530809 | 6530.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
