Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase | D5071_20475 | Not Available | Positive | 4513574 - 4514308 | 27644.7 |
| alginate lyase | D5071_20480 | Not Available | Positive | 4514379 - 4515674 | 48653.8 |
| osmotically-inducible protein osmy | D5071_20485 | Not Available | Negative | 4515797 - 4516369 | 19847.8 |
| dnaa initiator-associating protein diaa | D5071_20490 | Not Available | Negative | 4516381 - 4516971 | 21038.3 |
| yran family protein | D5071_20495 | Not Available | Negative | 4517035 - 4517430 | 14567.2 |
| penicillin-binding protein activator | D5071_20500 | Not Available | Negative | 4517388 - 4519406 | 72284.0 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | D5071_20505 | Not Available | Positive | 4519468 - 4520355 | 32247.5 |
| elongation factor tu | D5071_20515 | Not Available | Positive | 4520758 - 4520837 | 2528.07 |
| bacterioferritin-associated ferredoxin | D5071_20520 | Not Available | Positive | 4521042 - 4521236 | 7365.08 |
| bacterioferritin | D5071_20525 | Not Available | Positive | 4521309 - 4521782 | 18243.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
