Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | D5071_01470 | Not Available | Positive | 295402 - 296859 | 52715.0 |
| acyltransferase | D5071_01475 | Not Available | Negative | 296890 - 297882 | 36869.2 |
| aldehyde dehydrogenase | D5071_01480 | Not Available | Negative | 298081 - 299616 | 55951.2 |
| formate dehydrogenase accessory sulfurtransferase fdhd | D5071_01485 | Not Available | Positive | 299835 - 300668 | 29752.7 |
| superoxide dismutase | D5071_01490 | Not Available | Positive | 300904 - 301530 | 22968.0 |
| hamp domain-containing protein | D5071_01495 | Not Available | Positive | 301830 - 303722 | 68340.2 |
| yibl family ribosome-associated protein | D5071_01500 | Not Available | Negative | 303818 - 304180 | 13576.7 |
| mltr family transcriptional regulator | D5071_01505 | Not Available | Negative | 304307 - 304837 | 19588.0 |
| mannitol-1-phosphate 5-dehydrogenase | D5071_01510 | Not Available | Negative | 304990 - 306138 | 41470.7 |
| pts mannitol transporter subunit iicba | D5071_01515 | Not Available | Negative | 306200 - 308107 | 67397.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
