Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | D5071_20425 | Not Available | Positive | 4499065 - 4499493 | 16033.5 |
| 30s ribosomal protein s9 | D5071_20430 | Not Available | Positive | 4499509 - 4499901 | 14805.0 |
| stringent starvation protein a | D5071_20435 | Not Available | Positive | 4500233 - 4500874 | 24295.4 |
| clpxp protease specificity-enhancing factor | D5071_20440 | Not Available | Positive | 4500880 - 4501383 | 18058.3 |
| (s)-acetoin forming diacetyl reductase | D5071_20445 | Not Available | Negative | 4501442 - 4502215 | 27086.2 |
| glutamate synthase small subunit | D5071_20450 | Not Available | Negative | 4502484 - 4503902 | 51782.1 |
| glutamate synthase large subunit | D5071_20455 | Not Available | Negative | 4503912 - 4508372 | 163581.0 |
| tigr01212 family radical sam protein | D5071_20460 | Not Available | Positive | 4509024 - 4509953 | 34824.8 |
| aerobic respiration two-component sensor histidine kinase arcb | D5071_20465 | Not Available | Positive | 4510065 - 4512434 | 89330.7 |
| isoprenoid biosynthesis protein elbb | D5071_20470 | Not Available | Positive | 4512924 - 4513577 | 22880.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
