Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid asymmetry maintenance abc transporter permease subunit mlae | D5071_20375 | Not Available | Positive | 4490043 - 4490825 | 27853.9 |
| outer membrane lipid asymmetry maintenance protein mlad | D5071_20380 | Not Available | Positive | 4490830 - 4491396 | 20267.2 |
| phospholipid-binding protein mlac | D5071_20385 | Not Available | Positive | 4491409 - 4492038 | 23784.6 |
| lipid asymmetry maintenance protein mlab | D5071_20390 | Not Available | Positive | 4492052 - 4492342 | 10455.5 |
| bola family iron metabolism protein ibag | D5071_20395 | Not Available | Positive | 4492477 - 4492731 | 9462.37 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | D5071_20400 | Not Available | Positive | 4492815 - 4494077 | 44905.4 |
| serine endoprotease degs | D5071_20405 | Not Available | Negative | 4494185 - 4495282 | 38694.6 |
| serine endoprotease degq | D5071_20410 | Not Available | Negative | 4495420 - 4496790 | 47797.6 |
| duf1043 family protein | D5071_20415 | Not Available | Negative | 4497050 - 4497454 | 15324.2 |
| afg1 family atpase | D5071_20420 | Not Available | Positive | 4497676 - 4498827 | 44075.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
