Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad:protein fmn transferase | D5071_20275 | Not Available | Positive | 4473276 - 4474256 | 36233.5 |
| hypothetical protein | D5071_20280 | Not Available | Negative | 4474362 - 4474919 | 20531.7 |
| hypothetical protein | D5071_20285 | Not Available | Negative | 4475526 - 4476080 | 20512.1 |
| fumarylacetoacetate hydrolase family protein | D5071_20290 | Not Available | Positive | 4476665 - 4477321 | 23906.9 |
| ycgn family cysteine cluster protein | D5071_20295 | Not Available | Positive | 4477439 - 4477885 | 17692.9 |
| dna polymerase iii subunit theta | D5071_20300 | Not Available | Positive | 4478123 - 4478320 | 7933.34 |
| metalloprotease pmba | D5071_20305 | Not Available | Positive | 4478589 - 4479929 | 47992.9 |
| nucleoside diphosphate kinase regulator | D5071_20310 | Not Available | Negative | 4480015 - 4480425 | 15135.0 |
| pts phosphocarrier protein npr | D5071_20315 | Not Available | Negative | 4480598 - 4480870 | 9768.71 |
| rnase adaptor protein rapz | D5071_20320 | Not Available | Negative | 4480902 - 4481759 | 32574.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
