Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_20225 | Not Available | Negative | 4454852 - 4455586 | 26897.0 |
| carbon starvation protein a | D5071_20230 | Not Available | Negative | 4455902 - 4457965 | 74198.6 |
| aldo/keto reductase family oxidoreductase | D5071_20235 | Not Available | Negative | 4458190 - 4459107 | 33814.4 |
| exoribonuclease ii | D5071_20240 | Not Available | Negative | 4459167 - 4461101 | 72296.8 |
| cbbbc protein | D5071_20245 | Not Available | Negative | 4461338 - 4463650 | 84586.0 |
| lysr family transcriptional regulator | D5071_20250 | Not Available | Positive | 4463943 - 4464845 | 33196.1 |
| laci family transcriptional regulator | D5071_20255 | Not Available | Negative | 4464836 - 4465906 | 39319.5 |
| mfs transporter | D5071_20260 | Not Available | Positive | 4466227 - 4467537 | 47992.4 |
| glycoside hydrolase family 31 protein | D5071_20265 | Not Available | Positive | 4467572 - 4469935 | 90722.5 |
| flavocytochrome c | D5071_20270 | Not Available | Positive | 4470284 - 4473160 | 103112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
