Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h(+)/cl(-) exchange transporter clca | D5071_19920 | Not Available | Negative | 4388602 - 4390017 | 49958.7 |
| glutamate-1-semialdehyde-2,1-aminomutase | D5071_19925 | Not Available | Positive | 4390190 - 4391470 | 45236.7 |
| glutathione s-transferase | D5071_19930 | Not Available | Positive | 4391633 - 4392256 | 23740.9 |
| plp-dependent aminotransferase family protein | D5071_19935 | Not Available | Negative | 4392259 - 4393731 | 54550.8 |
| lyse family translocator | D5071_19940 | Not Available | Positive | 4393867 - 4394457 | 21485.2 |
| fe(3+)-hydroxamate abc transporter permease fhub | D5071_19945 | Not Available | Negative | 4394500 - 4396518 | 71231.8 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | D5071_19950 | Not Available | Negative | 4396511 - 4397437 | 34105.4 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | D5071_19955 | Not Available | Negative | 4397454 - 4398251 | 28496.8 |
| bifunctional glycosyl transferase/transpeptidase | D5071_19960 | Not Available | Negative | 4398594 - 4401074 | 92534.5 |
| atp-dependent helicase hrpb | D5071_19965 | Not Available | Negative | 4401177 - 4403639 | 91113.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
