Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter permease subunit cysw | D5071_19870 | Not Available | Negative | 4377883 - 4378764 | 32499.5 |
| sulfate abc transporter permease subunit cyst | D5071_19875 | Not Available | Negative | 4378777 - 4379589 | 29230.9 |
| sulfate abc transporter substrate-binding protein | D5071_19880 | Not Available | Negative | 4379746 - 4380756 | 37020.8 |
| cdar family transcriptional regulator | D5071_19885 | Not Available | Negative | 4381146 - 4382303 | 43084.4 |
| serine endoprotease degp | D5071_19890 | Not Available | Negative | 4382536 - 4383984 | 49986.6 |
| dgtpase | D5071_19895 | Not Available | Negative | 4384174 - 4385685 | 58874.0 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | D5071_19900 | Not Available | Positive | 4385807 - 4386505 | 24514.7 |
| vitamin b12 abc transporter substrate-binding protein btuf | D5071_19905 | Not Available | Positive | 4386508 - 4387338 | 30475.7 |
| hypothetical protein | D5071_19910 | Not Available | Positive | 4387566 - 4387844 | 9708.7 |
| iron-sulfur cluster insertion protein erpa | D5071_19915 | Not Available | Negative | 4388176 - 4388523 | 12184.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
