Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uridine(2552)-2'-o)-methyltransferase | D5071_19765 | Not Available | Positive | 4354733 - 4355362 | 23275.4 |
| atp-dependent zinc metalloprotease ftsh | D5071_19770 | Not Available | Positive | 4355419 - 4357359 | 70992.6 |
| dihydropteroate synthase | D5071_19775 | Not Available | Positive | 4357477 - 4358310 | 29922.3 |
| phosphoglucosamine mutase | D5071_19780 | Not Available | Positive | 4358318 - 4359655 | 47694.7 |
| preprotein translocase subunit secg | D5071_19785 | Not Available | Positive | 4359905 - 4360237 | 11366.9 |
| Trna-leu | Not Available | Not Available | Positive | 4360262 - 4360348 | Not Available |
| aminomethyl-transferring glycine dehydrogenase | D5071_19795 | Not Available | Negative | 4360579 - 4363470 | 104600.0 |
| glycine cleavage system protein gcvh | D5071_19800 | Not Available | Negative | 4363589 - 4363981 | 14133.2 |
| glycine cleavage system aminomethyltransferase gcvt | D5071_19805 | Not Available | Negative | 4364157 - 4365272 | 40650.8 |
| lactaldehyde reductase | D5071_19810 | Not Available | Positive | 4365834 - 4366985 | 41101.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
