Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cro/cl family transcriptional regulator | D5071_19715 | Not Available | Positive | 4346529 - 4346915 | 14400.3 |
| cro/cl family transcriptional regulator | D5071_19720 | Not Available | Positive | 4347166 - 4347540 | 14324.0 |
| octaprenyl diphosphate synthase | D5071_19725 | Not Available | Negative | 4347619 - 4348590 | 35326.2 |
| 50s ribosomal protein l21 | D5071_19730 | Not Available | Positive | 4348847 - 4349158 | 11550.0 |
| 50s ribosomal protein l27 | D5071_19735 | Not Available | Positive | 4349178 - 4349435 | 9152.06 |
| dmt family transporter | D5071_19740 | Not Available | Positive | 4349525 - 4350487 | 35240.7 |
| obg family gtpase cgta | D5071_19745 | Not Available | Positive | 4350747 - 4351919 | 43002.8 |
| serine-type d-ala-d-ala carboxypeptidase | D5071_19750 | Not Available | Negative | 4351989 - 4353422 | 51887.3 |
| transcription elongation factor grea | D5071_19755 | Not Available | Positive | 4353691 - 4354167 | 17788.1 |
| ribosome assembly rna-binding protein yhby | D5071_19760 | Not Available | Negative | 4354296 - 4354589 | 10713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
