Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_19665 | Not Available | Negative | 4337396 - 4337674 | 10946.5 |
| Trna-met | Not Available | Not Available | Positive | 4337860 - 4337935 | Not Available |
| g/u mismatch-specific dna glycosylase | D5071_19675 | Not Available | Positive | 4338076 - 4338579 | 18541.3 |
| rna polymerase sigma factor rpod | D5071_19680 | Not Available | Negative | 4338678 - 4340513 | 70050.0 |
| dna primase | D5071_19685 | Not Available | Negative | 4340667 - 4342421 | 66351.8 |
| 30s ribosomal protein s21 | D5071_19690 | Not Available | Negative | 4342576 - 4342791 | 8500.42 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | D5071_19695 | Not Available | Positive | 4343019 - 4344032 | 35867.1 |
| transcriptional regulator argr | D5071_19700 | Not Available | Negative | 4344130 - 4344600 | 17153.7 |
| malate dehydrogenase | D5071_19705 | Not Available | Positive | 4345070 - 4346008 | 32410.3 |
| transcriptional regulator | D5071_19710 | Not Available | Negative | 4346078 - 4346341 | 9844.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
