Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs2 family permease | D5071_19600 | Not Available | Negative | 4325481 - 4326836 | 46283.3 |
| hypothetical protein | D5071_19605 | Not Available | Positive | 4326835 - 4327029 | 7703.72 |
| hypothetical protein | D5071_19610 | Not Available | Positive | 4327248 - 4327664 | 15926.8 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | D5071_19615 | Not Available | Negative | 4327917 - 4328840 | 35201.2 |
| duf4102 domain-containing protein | D5071_19620 | Not Available | Positive | 4329832 - 4331232 | 52329.1 |
| hypothetical protein | D5071_19625 | Not Available | Positive | 4331225 - 4332037 | 31236.6 |
| helix-turn-helix domain-containing protein | D5071_19640 | Not Available | Negative | 4334384 - 4334758 | 14318.0 |
| hypothetical protein | D5071_19650 | Not Available | Negative | 4335789 - 4336022 | 8825.58 |
| hypothetical protein | D5071_19655 | Not Available | Positive | 4336313 - 4336996 | 25531.6 |
| hypothetical protein | D5071_19660 | Not Available | Negative | 4337158 - 4337409 | 9435.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
