Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpaf family protein | D5071_19550 | Not Available | Negative | 4313904 - 4315307 | 51876.7 |
| hypothetical protein | D5071_19555 | Not Available | Negative | 4315368 - 4316567 | 43259.2 |
| pilus assembly protein pilz | D5071_19560 | Not Available | Negative | 4316582 - 4317268 | 24794.1 |
| type ii and iii secretion system protein family protein | D5071_19565 | Not Available | Negative | 4317290 - 4318729 | 50104.1 |
| flp pilus assembly protein cpab | D5071_19570 | Not Available | Negative | 4318810 - 4319760 | 33510.4 |
| peptidase a24 | D5071_19575 | Not Available | Negative | 4319807 - 4320358 | 19575.9 |
| flp family type ivb pilin | D5071_19580 | Not Available | Negative | 4320366 - 4320587 | 7397.95 |
| sensor histidine kinase | D5071_19585 | Not Available | Negative | 4320901 - 4322400 | 56569.9 |
| dna-binding response regulator | D5071_19590 | Not Available | Negative | 4322378 - 4323088 | 26988.2 |
| na+/h+ antiporter | D5071_19595 | Not Available | Negative | 4323447 - 4325093 | 60359.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
