Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | D5071_19500 | Not Available | Negative | 4294219 - 4295574 | 50902.5 |
| efflux rnd transporter periplasmic adaptor subunit | D5071_19505 | Not Available | Negative | 4295571 - 4296326 | 27030.6 |
| tolc family protein | D5071_19510 | Not Available | Negative | 4296326 - 4298131 | 65595.7 |
| hypothetical protein | D5071_19515 | Not Available | Negative | 4298250 - 4307924 | 334947.0 |
| pilus assembly protein | D5071_19520 | Not Available | Negative | 4307982 - 4309601 | 59616.1 |
| hypothetical protein | D5071_19525 | Not Available | Negative | 4309798 - 4310448 | 23778.9 |
| hypothetical protein | D5071_19530 | Not Available | Negative | 4310441 - 4310989 | 20360.5 |
| tetratricopeptide repeat protein | D5071_19535 | Not Available | Negative | 4310989 - 4311840 | 30014.2 |
| type ii secretion system f family protein | D5071_19540 | Not Available | Negative | 4311931 - 4312890 | 34777.2 |
| pilus assembly protein | D5071_19545 | Not Available | Negative | 4312905 - 4313885 | 36542.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
