Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | D5071_01370 | Not Available | Negative | 274813 - 275937 | 42745.5 |
| inositol phosphorylceramide synthase | D5071_01375 | Not Available | Negative | 275942 - 276598 | 24104.0 |
| cof synthetase | D5071_01380 | Not Available | Negative | 276595 - 277881 | 48875.9 |
| mbl fold metallo-hydrolase | D5071_01385 | Not Available | Negative | 277878 - 278684 | 30025.9 |
| nad(p)-dependent oxidoreductase | D5071_01390 | Not Available | Negative | 278677 - 279705 | 37871.2 |
| ketoacyl-acp synthase iii | D5071_01395 | Not Available | Negative | 279702 - 280715 | 35910.4 |
| hypothetical protein | D5071_01400 | Not Available | Negative | 280618 - 280866 | 9114.92 |
| glpm family protein | D5071_01405 | Not Available | Positive | 281042 - 281383 | 12673.0 |
| rhodanese-like domain-containing protein | D5071_01410 | Not Available | Negative | 281428 - 281817 | 14129.6 |
| transcriptional regulator ftra | D5071_01415 | Not Available | Positive | 281937 - 282932 | 36223.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
