Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_19400 | Not Available | Positive | 4269989 - 4271185 | 45526.9 |
| dihydromonapterin reductase | D5071_19405 | Not Available | Negative | 4271218 - 4271940 | 26385.9 |
| hypothetical protein | D5071_19410 | Not Available | Positive | 4272079 - 4272495 | 15676.0 |
| c4-dicarboxylic acid transporter daua | D5071_19415 | Not Available | Negative | 4272540 - 4274237 | 60258.4 |
| sodium-potassium/proton antiporter chaa | D5071_19420 | Not Available | Negative | 4274401 - 4275501 | 39283.9 |
| siderophore-interacting protein | D5071_19425 | Not Available | Negative | 4275829 - 4276632 | 30137.9 |
| hypothetical protein | D5071_19430 | Not Available | Negative | 4277281 - 4278507 | 45873.1 |
| conjugal transfer protein | D5071_19435 | Not Available | Positive | 4279553 - 4280944 | 52666.5 |
| cytochrome p450 | D5071_19440 | Not Available | Positive | 4281353 - 4282525 | 45134.4 |
| adenylosuccinate synthase | D5071_19445 | Not Available | Positive | 4282518 - 4283774 | 47459.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
