Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | D5071_19300 | Not Available | Negative | 4245230 - 4246453 | 44338.7 |
| n-acetylglucosamine-6-phosphate deacetylase | D5071_19305 | Not Available | Negative | 4246551 - 4247696 | 41327.5 |
| glucosamine-6-phosphate deaminase | D5071_19310 | Not Available | Negative | 4247715 - 4248515 | 29621.8 |
| pts glucose transporter subunit iibc | D5071_19315 | Not Available | Positive | 4248874 - 4250370 | 53320.6 |
| glutamine--trna ligase | D5071_19320 | Not Available | Positive | 4250562 - 4252220 | 63233.6 |
| ferric iron uptake transcriptional regulator | D5071_19325 | Not Available | Negative | 4252283 - 4252732 | 17097.3 |
| flavodoxin flda | D5071_19330 | Not Available | Negative | 4253063 - 4253590 | 19530.7 |
| methyl-accepting chemotaxis protein | D5071_19335 | Not Available | Positive | 4254478 - 4256145 | 59233.4 |
| lexa regulated protein | D5071_19340 | Not Available | Negative | 4256264 - 4256545 | 10913.0 |
| esterase | D5071_19345 | Not Available | Negative | 4256835 - 4257602 | 28728.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
