Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | D5071_19250 | Not Available | Positive | 4237434 - 4237733 | 11091.3 |
| tautomerase family protein | D5071_19255 | Not Available | Positive | 4237738 - 4238127 | 15088.0 |
| discoidin domain-containing protein | D5071_19260 | Not Available | Negative | 4238267 - 4238746 | 17498.6 |
| ribosomal-protein-alanine n-acetyltransferase | D5071_19265 | Not Available | Negative | 4238951 - 4239394 | 16773.9 |
| dna polymerase iii subunit psi | D5071_19270 | Not Available | Negative | 4239363 - 4239776 | 15423.5 |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | D5071_19275 | Not Available | Positive | 4239936 - 4240985 | 38063.5 |
| aldo/keto reductase | D5071_19280 | Not Available | Negative | 4240988 - 4241980 | 36337.5 |
| lysr family transcriptional regulator | D5071_19285 | Not Available | Positive | 4242094 - 4242999 | 34044.4 |
| hypothetical protein | D5071_19290 | Not Available | Positive | 4243123 - 4243346 | 7890.57 |
| asparagine synthase b | D5071_19295 | Not Available | Negative | 4243362 - 4245026 | 62724.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
