Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slp family lipoprotein | D5071_19100 | Not Available | Positive | 4203647 - 4204270 | 22719.5 |
| long-chain-fatty-acid--coa ligase fadd | D5071_19105 | Not Available | Positive | 4204439 - 4206157 | 63621.9 |
| ribonuclease d | D5071_19110 | Not Available | Positive | 4206370 - 4207494 | 42062.6 |
| hypothetical protein | D5071_19115 | Not Available | Negative | 4207546 - 4207770 | 8872.03 |
| Trna-met | Not Available | Not Available | Positive | 4208091 - 4208167 | Not Available |
| ribosome maturation factor rimp | D5071_19125 | Not Available | Positive | 4208386 - 4208838 | 16604.0 |
| transcription termination/antitermination protein nusa | D5071_19130 | Not Available | Positive | 4208860 - 4210389 | 56427.8 |
| translation initiation factor if-2 | D5071_19135 | Not Available | Positive | 4210415 - 4213114 | 98670.1 |
| 30s ribosome-binding factor rbfa | D5071_19140 | Not Available | Positive | 4213189 - 4213587 | 14853.9 |
| trna pseudouridine(55) synthase trub | D5071_19145 | Not Available | Positive | 4213587 - 4214531 | 34980.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
