Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_19050 | Not Available | Negative | 4194325 - 4194519 | 7479.61 |
| hypothetical protein | D5071_19055 | Not Available | Negative | 4194512 - 4195153 | 23618.7 |
| hypothetical protein | D5071_19060 | Not Available | Negative | 4195243 - 4195716 | 18127.8 |
| hypothetical protein | D5071_19065 | Not Available | Negative | 4195797 - 4196144 | 13329.9 |
| dna-binding protein | D5071_19070 | Not Available | Negative | 4196540 - 4197427 | 32837.7 |
| hypothetical protein | D5071_19075 | Not Available | Positive | 4198351 - 4199199 | 32436.8 |
| hypothetical protein | D5071_19080 | Not Available | Negative | 4199350 - 4200072 | 27456.3 |
| rida family protein | D5071_19085 | Not Available | Negative | 4200236 - 4200580 | 12427.8 |
| atp-dependent dna helicase | D5071_19090 | Not Available | Positive | 4200810 - 4202729 | 70778.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | D5071_19095 | Not Available | Positive | 4202846 - 4203547 | 25002.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
