Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_01320 | Not Available | Positive | 265157 - 265714 | 21434.5 |
| hypothetical protein | D5071_01325 | Not Available | Negative | 265761 - 266306 | 20560.6 |
| hypothetical protein | D5071_01330 | Not Available | Positive | 266486 - 266806 | 12158.2 |
| duf596 domain-containing protein | D5071_01335 | Not Available | Positive | 266838 - 267200 | 13554.9 |
| ai-2e family transporter | D5071_01340 | Not Available | Negative | 267266 - 268465 | 43674.3 |
| alpha-hydroxy-acid oxidizing protein | D5071_01345 | Not Available | Negative | 268604 - 269764 | 41754.6 |
| aldehyde dehydrogenase | D5071_01350 | Not Available | Negative | 269870 - 271309 | 51858.2 |
| duf1311 domain-containing protein | D5071_01355 | Not Available | Negative | 271598 - 272527 | 34490.4 |
| acyl-coa desaturase | D5071_01360 | Not Available | Negative | 272584 - 273681 | 42328.8 |
| acyl-coa desaturase | D5071_01365 | Not Available | Negative | 273681 - 274820 | 43970.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
