Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_18900 | Not Available | Positive | 4150642 - 4153104 | 92139.5 |
| glycoside hydrolase family 105 protein | D5071_18905 | Not Available | Positive | 4153106 - 4154212 | 41010.9 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | D5071_18910 | Not Available | Positive | 4154215 - 4155306 | 40493.3 |
| sugar abc transporter permease | D5071_18915 | Not Available | Positive | 4155330 - 4156328 | 36862.0 |
| carbohydrate abc transporter permease | D5071_18920 | Not Available | Positive | 4156337 - 4157389 | 39416.4 |
| laci family transcriptional regulator | D5071_18925 | Not Available | Positive | 4157389 - 4158438 | 38170.4 |
| plp-dependent aminotransferase family protein | D5071_18930 | Not Available | Negative | 4158480 - 4159898 | 52227.0 |
| gnat family n-acetyltransferase | D5071_18935 | Not Available | Positive | 4159990 - 4160427 | 16250.7 |
| carboxymuconolactone decarboxylase family protein | D5071_18940 | Not Available | Positive | 4160562 - 4160993 | 15745.8 |
| hypothetical protein | D5071_18945 | Not Available | Positive | 4161080 - 4161694 | 23010.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
