Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-threonate 4-phosphate dehydrogenase | D5071_18850 | Not Available | Positive | 4139965 - 4140945 | 34975.7 |
| deor/glpr transcriptional regulator | D5071_18855 | Not Available | Positive | 4141103 - 4141918 | 29604.6 |
| hypothetical protein | D5071_18860 | Not Available | Negative | 4141959 - 4142429 | 17717.8 |
| metal abc transporter substrate-binding protein | D5071_18865 | Not Available | Negative | 4142537 - 4143415 | 31417.1 |
| metal abc transporter permease | D5071_18870 | Not Available | Negative | 4143457 - 4144311 | 30316.7 |
| abc transporter atp-binding protein | D5071_18875 | Not Available | Negative | 4144308 - 4145036 | 26197.8 |
| phosphoesterase | D5071_18880 | Not Available | Negative | 4145582 - 4147405 | 67703.6 |
| glucosamine kinase | D5071_18885 | Not Available | Negative | 4147431 - 4148336 | 31716.3 |
| glucosamine kinase | D5071_18890 | Not Available | Negative | 4148333 - 4148884 | 20240.1 |
| carbohydrate abc transporter substrate-binding protein | D5071_18895 | Not Available | Negative | 4148881 - 4150188 | 48975.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
