Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D5071_18695 | Not Available | Negative | 4106110 - 4107195 | 39900.1 |
| iron abc transporter permease | D5071_18700 | Not Available | Negative | 4107200 - 4108822 | 59310.4 |
| hypothetical protein | D5071_18705 | Not Available | Positive | 4109242 - 4109589 | 12891.4 |
| polyamine aminopropyltransferase | D5071_18710 | Not Available | Positive | 4109697 - 4110560 | 32353.2 |
| adenosylmethionine decarboxylase | D5071_18715 | Not Available | Positive | 4110605 - 4111399 | 30355.1 |
| glutaredoxin-like protein nrdh | D5071_18720 | Not Available | Positive | 4112173 - 4112412 | 8924.67 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | D5071_18725 | Not Available | Positive | 4112422 - 4112829 | 14899.9 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | D5071_18730 | Not Available | Positive | 4112808 - 4114988 | 82413.0 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | D5071_18735 | Not Available | Positive | 4115013 - 4115975 | 36549.0 |
| Trna-asp | Not Available | Not Available | Positive | 4116099 - 4116175 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
