Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_18645 | Not Available | Positive | 4099011 - 4099247 | 8664.64 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | D5071_18650 | Not Available | Positive | 4099326 - 4099886 | 20150.3 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | D5071_18655 | Not Available | Positive | 4100023 - 4101615 | 55852.6 |
| hypothetical protein | D5071_18660 | Not Available | Positive | 4101710 - 4101919 | 7671.6 |
| hypothetical protein | D5071_18665 | Not Available | Negative | 4102121 - 4102300 | 6987.57 |
| hnh endonuclease | D5071_18670 | Not Available | Positive | 4102719 - 4103666 | 36760.7 |
| integrase | D5071_18675 | Not Available | Negative | 4103716 - 4104107 | 14605.5 |
| carbonate dehydratase | D5071_18680 | Not Available | Positive | 4104288 - 4104929 | 24330.2 |
| hypoxanthine phosphoribosyltransferase | D5071_18685 | Not Available | Negative | 4104989 - 4105525 | 20147.3 |
| n-acetyltransferase | D5071_18690 | Not Available | Positive | 4105675 - 4106109 | 15798.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
