Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase/bleomycin resistance/dioxygenase family protein | D5071_18480 | Not Available | Negative | 4077782 - 4078213 | 15749.8 |
| integrase | D5071_18545 | Not Available | Positive | 4086613 - 4086977 | 13754.3 |
| hnh endonuclease | D5071_18550 | Not Available | Negative | 4087098 - 4087820 | 27939.0 |
| hypothetical protein | D5071_18555 | Not Available | Positive | 4088308 - 4088529 | 8490.11 |
| duf4926 domain-containing protein | D5071_18560 | Not Available | Negative | 4088636 - 4088845 | 7873.49 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | D5071_18570 | Not Available | Negative | 4090798 - 4092336 | 53313.4 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | D5071_18575 | Not Available | Negative | 4092688 - 4093242 | 19831.3 |
| hypothetical protein | D5071_18580 | Not Available | Negative | 4093416 - 4093481 | 2473.88 |
| hypothetical protein | D5071_18585 | Not Available | Negative | 4093581 - 4093982 | 15917.7 |
| hypothetical protein | D5071_18590 | Not Available | Negative | 4094304 - 4094747 | 17331.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
