Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D5071_18430 | Not Available | Positive | 4068424 - 4070166 | 63590.9 |
| abc transporter permease | D5071_18435 | Not Available | Positive | 4070159 - 4071334 | 43786.9 |
| abc transporter permease | D5071_18440 | Not Available | Positive | 4071344 - 4072480 | 41919.4 |
| bax inhibitor-1/ycca family protein | D5071_18445 | Not Available | Negative | 4072880 - 4073587 | 25916.1 |
| molybdopterin synthase catalytic subunit moae | D5071_18450 | Not Available | Negative | 4073699 - 4074151 | 17038.0 |
| molybdopterin synthase sulfur carrier subunit | D5071_18455 | Not Available | Negative | 4074154 - 4074399 | 8842.63 |
| cyclic pyranopterin monophosphate synthase moac | D5071_18460 | Not Available | Negative | 4074396 - 4074890 | 17365.2 |
| molybdenum cofactor biosynthesis protein b | D5071_18465 | Not Available | Negative | 4074909 - 4075427 | 18831.3 |
| gtp 3',8-cyclase moaa | D5071_18470 | Not Available | Negative | 4075462 - 4076451 | 37061.3 |
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | D5071_18475 | Not Available | Positive | 4076874 - 4077806 | 33490.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
