Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D5071_18330 | Not Available | Positive | 4045583 - 4046467 | 33001.6 |
| mfs transporter | D5071_18335 | Not Available | Positive | 4046486 - 4047625 | 39949.9 |
| hypothetical protein | D5071_18340 | Not Available | Negative | 4048110 - 4048499 | 14089.9 |
| atp-dependent dethiobiotin synthetase biod | D5071_18345 | Not Available | Negative | 4048804 - 4049484 | 24604.7 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | D5071_18350 | Not Available | Negative | 4049477 - 4050238 | 27981.3 |
| 8-amino-7-oxononanoate synthase | D5071_18355 | Not Available | Negative | 4050219 - 4051376 | 42034.9 |
| biotin synthase | D5071_18360 | Not Available | Negative | 4051416 - 4052453 | 38634.2 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | D5071_18365 | Not Available | Positive | 4052549 - 4053853 | 48024.9 |
| hypothetical protein | D5071_18370 | Not Available | Positive | 4054056 - 4054463 | 14971.0 |
| cidb/lrgb family autolysis modulator | D5071_18375 | Not Available | Positive | 4054463 - 4055158 | 24534.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
