Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | D5071_18225 | Not Available | Positive | 4018415 - 4019107 | 24949.4 |
| extracellular solute-binding protein | D5071_18230 | Not Available | Positive | 4019124 - 4020104 | 34991.0 |
| iron abc transporter permease | D5071_18235 | Not Available | Positive | 4020304 - 4021959 | 58472.3 |
| duf2517 family protein | D5071_18240 | Not Available | Negative | 4022125 - 4022331 | 8006.93 |
| k(+)-transporting atpase subunit f | D5071_18245 | Not Available | Positive | 4022754 - 4022843 | 3208.25 |
| potassium-transporting atpase subunit kdpa | D5071_18250 | Not Available | Positive | 4022843 - 4024531 | 59279.7 |
| k(+)-transporting atpase subunit b | D5071_18255 | Not Available | Positive | 4024547 - 4026691 | 75788.2 |
| potassium-transporting atpase subunit kdpc | D5071_18260 | Not Available | Positive | 4026711 - 4027286 | 20547.7 |
| is3 family transposase | D5071_18265 | Not Available | Positive | 4027486 - 4027825 | 12716.0 |
| is3 family transposase | D5071_18270 | Not Available | Positive | 4027873 - 4028856 | 37944.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
