Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i ubiquinol oxidase subunit cyda | D5071_18125 | Not Available | Negative | 3994884 - 3996452 | 58095.4 |
| hypothetical protein | D5071_18130 | Not Available | Negative | 3997174 - 3998343 | 42349.9 |
| succinate--coa ligase subunit alpha | D5071_18135 | Not Available | Negative | 3998571 - 3999443 | 29782.2 |
| adp-forming succinate--coa ligase subunit beta | D5071_18140 | Not Available | Negative | 3999443 - 4000609 | 41213.7 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | D5071_18145 | Not Available | Negative | 4000812 - 4002038 | 44438.3 |
| 2-oxoglutarate dehydrogenase e1 component | D5071_18150 | Not Available | Negative | 4002054 - 4004861 | 105585.0 |
| succinate dehydrogenase iron-sulfur subunit | D5071_18155 | Not Available | Negative | 4005137 - 4005853 | 26767.4 |
| succinate dehydrogenase flavoprotein subunit | D5071_18160 | Not Available | Negative | 4005870 - 4007636 | 64462.5 |
| succinate dehydrogenase membrane anchor subunit | D5071_18165 | Not Available | Negative | 4007636 - 4007983 | 12816.3 |
| succinate dehydrogenase cytochrome b556 subunit | D5071_18170 | Not Available | Negative | 4007977 - 4008366 | 14128.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
