Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein cpob | D5071_18075 | Not Available | Negative | 3987639 - 3988415 | 28038.7 |
| peptidoglycan-associated lipoprotein pal | D5071_18080 | Not Available | Negative | 3988425 - 3988937 | 18531.9 |
| tol-pal system protein tolb | D5071_18085 | Not Available | Negative | 3988978 - 3990270 | 45920.1 |
| cell envelope integrity protein tola | D5071_18090 | Not Available | Negative | 3990409 - 3991584 | 41177.1 |
| colicin uptake protein tolr | D5071_18095 | Not Available | Negative | 3991649 - 3992074 | 15356.8 |
| tol-pal system protein tolq | D5071_18100 | Not Available | Negative | 3992087 - 3992773 | 25458.9 |
| acyl-coa thioesterase ybgc | D5071_18105 | Not Available | Negative | 3992770 - 3993174 | 15325.5 |
| cyd operon protein ybge | D5071_18110 | Not Available | Negative | 3993308 - 3993601 | 10916.7 |
| cytochrome bd-i oxidase subunit cydx | D5071_18115 | Not Available | Negative | 3993598 - 3993714 | 4173.02 |
| cytochrome d ubiquinol oxidase subunit ii | D5071_18120 | Not Available | Negative | 3993731 - 3994870 | 42158.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
