Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | D5071_01220 | Not Available | Negative | 243586 - 244227 | 23349.2 |
| ribonuclease ph | D5071_01225 | Not Available | Negative | 244507 - 245223 | 25501.7 |
| l-ala-d/l-glu epimerase | D5071_01230 | Not Available | Positive | 245425 - 246393 | 35040.7 |
| abc transporter atp-binding protein | D5071_01235 | Not Available | Positive | 246437 - 248308 | 68480.7 |
| glutathione abc transporter substrate-binding protein | D5071_01240 | Not Available | Positive | 248397 - 249938 | 56825.3 |
| abc transporter permease subunit | D5071_01245 | Not Available | Positive | 249957 - 250877 | 33855.5 |
| abc transporter permease subunit | D5071_01250 | Not Available | Positive | 250886 - 251785 | 32364.5 |
| s58 family peptidase | D5071_01255 | Not Available | Positive | 251812 - 252870 | 36847.2 |
| aminopeptidase | D5071_01260 | Not Available | Positive | 252897 - 253718 | 29726.5 |
| isoaspartyl peptidase/l-asparaginase | D5071_01265 | Not Available | Positive | 253777 - 254724 | 33035.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
