Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_17825 | Not Available | Positive | 3929044 - 3932097 | 117782.0 |
| oxidoreductase fes-binding subunit | D5071_17830 | Not Available | Positive | 3932402 - 3934426 | 73437.0 |
| 4fe-4s dicluster domain-containing protein | D5071_17835 | Not Available | Positive | 3934423 - 3934944 | 18669.5 |
| hypothetical protein | D5071_17840 | Not Available | Positive | 3935134 - 3935877 | 27845.6 |
| ncs2 family permease | D5071_17845 | Not Available | Negative | 3935933 - 3937270 | 46661.7 |
| hypothetical protein | D5071_17850 | Not Available | Negative | 3937595 - 3938917 | 46722.7 |
| hypothetical protein | D5071_17855 | Not Available | Negative | 3939002 - 3939880 | 31686.7 |
| ipad/sipd/sspd family type iii secretion system needle tip protein | D5071_17860 | Not Available | Negative | 3940325 - 3941473 | 42143.7 |
| type iii secretion system protein | D5071_17865 | Not Available | Negative | 3941598 - 3942857 | 43846.2 |
| type iii secretion system protein | D5071_17870 | Not Available | Negative | 3942916 - 3944817 | 67476.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
