Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | D5071_17775 | Not Available | Positive | 3919881 - 3921245 | 49235.7 |
| dna damage-inducible protein d | D5071_17780 | Not Available | Positive | 3921374 - 3922243 | 33420.9 |
| hypothetical protein | D5071_17785 | Not Available | Positive | 3922405 - 3922968 | 21379.8 |
| sdr family oxidoreductase | D5071_17790 | Not Available | Negative | 3923024 - 3923875 | 29325.0 |
| transcriptional regulator | D5071_17795 | Not Available | Positive | 3923989 - 3924399 | 15239.6 |
| tetr/acrr family transcriptional regulator | D5071_17800 | Not Available | Negative | 3924430 - 3924981 | 20080.5 |
| mfs transporter | D5071_17805 | Not Available | Positive | 3925085 - 3926587 | 52768.8 |
| hypothetical protein | D5071_17810 | Not Available | Negative | 3926710 - 3927369 | 23275.7 |
| duf4810 domain-containing protein | D5071_17815 | Not Available | Negative | 3927366 - 3927725 | 13282.0 |
| hypothetical protein | D5071_17820 | Not Available | Negative | 3927744 - 3928415 | 23999.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
