Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 1 protein | D5071_17615 | Not Available | Positive | 3883520 - 3884932 | 54039.5 |
| duf1471 domain-containing protein | D5071_17620 | Not Available | Negative | 3885116 - 3885373 | 8588.22 |
| duf3748 domain-containing protein | D5071_17625 | Not Available | Positive | 3885778 - 3886890 | 40688.6 |
| ycek/yidq family lipoprotein | D5071_17630 | Not Available | Negative | 3886926 - 3887282 | 12744.0 |
| heat-shock protein ibpa | D5071_17635 | Not Available | Positive | 3887537 - 3887950 | 15592.5 |
| heat shock chaperone ibpb | D5071_17640 | Not Available | Positive | 3888117 - 3888569 | 16886.9 |
| putative transporter | D5071_17645 | Not Available | Positive | 3888745 - 3890403 | 58883.8 |
| anion permease | D5071_17650 | Not Available | Positive | 3890976 - 3892388 | 51113.2 |
| two-component system sensor histidine kinase dcus | D5071_17655 | Not Available | Positive | 3892580 - 3894208 | 60618.2 |
| two-component system response regulator dcur | D5071_17660 | Not Available | Positive | 3894201 - 3894923 | 27338.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
