Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D5071_17565 | Not Available | Positive | 3872979 - 3873887 | 32755.3 |
| abc transporter atp-binding protein | D5071_17570 | Not Available | Positive | 3873927 - 3875726 | 66373.7 |
| hypothetical protein | D5071_17575 | Not Available | Negative | 3875810 - 3876520 | 26908.5 |
| glycosyl hydrolase family protein | D5071_17580 | Not Available | Negative | 3876549 - 3877343 | 30228.4 |
| aliphatic sulfonates abc transporter atp-binding protein | D5071_17585 | Not Available | Negative | 3877593 - 3878393 | 28691.9 |
| aliphatic sulfonate abc transporter permease ssuc | D5071_17590 | Not Available | Negative | 3878390 - 3879184 | 28674.5 |
| alkanesulfonate monooxygenase, fmnh(2)-dependent | D5071_17595 | Not Available | Negative | 3879195 - 3880337 | 41585.4 |
| sulfonate abc transporter substrate-binding protein | D5071_17600 | Not Available | Negative | 3880397 - 3881419 | 36718.2 |
| pts sugar transporter subunit iib | D5071_17605 | Not Available | Positive | 3881852 - 3882175 | 11759.4 |
| pts cellobiose transporter subunit iic | D5071_17610 | Not Available | Positive | 3882172 - 3883494 | 48329.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
