Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iic | D5071_17515 | Not Available | Positive | 3861826 - 3863139 | 47999.9 |
| pts lactose/cellobiose transporter subunit iia | D5071_17520 | Not Available | Positive | 3863129 - 3863473 | 12772.4 |
| 6-phospho-beta-glucosidase | D5071_17525 | Not Available | Positive | 3863504 - 3864946 | 55115.4 |
| sugar-phosphatase | D5071_17530 | Not Available | Positive | 3865466 - 3866281 | 30178.5 |
| lysr family transcriptional regulator | D5071_17535 | Not Available | Negative | 3866424 - 3867320 | 32588.9 |
| abc transporter substrate-binding protein | D5071_17540 | Not Available | Positive | 3867463 - 3869013 | 56236.1 |
| dihydrodipicolinate synthase family protein | D5071_17545 | Not Available | Positive | 3869085 - 3869969 | 31914.7 |
| nucleoside hydrolase | D5071_17550 | Not Available | Positive | 3870073 - 3871026 | 34382.7 |
| nucleoside hydrolase | D5071_17555 | Not Available | Positive | 3871028 - 3872005 | 35113.3 |
| abc transporter permease | D5071_17560 | Not Available | Positive | 3872005 - 3872982 | 35626.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
