Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dass family sodium-coupled anion symporter | D5071_17465 | Not Available | Negative | 3850409 - 3851863 | 52226.9 |
| na/pi cotransporter family protein | D5071_17470 | Not Available | Positive | 3852169 - 3853815 | 60150.5 |
| lysine-sensitive aspartokinase 3 | D5071_17475 | Not Available | Negative | 3853858 - 3855234 | 49473.4 |
| glucose-6-phosphate isomerase | D5071_17480 | Not Available | Positive | 3855715 - 3857364 | 61252.4 |
| duf4156 domain-containing protein | D5071_17485 | Not Available | Positive | 3857408 - 3857755 | 11638.6 |
| ef-p beta-lysylation protein epmb | D5071_17490 | Not Available | Negative | 3857815 - 3858867 | 39407.6 |
| elongation factor p | D5071_17495 | Not Available | Positive | 3858909 - 3859475 | 20733.3 |
| entericidin, ecna/b family | D5071_17500 | Not Available | Positive | 3859782 - 3859913 | 4436.48 |
| laci family dna-binding transcriptional regulator | D5071_17505 | Not Available | Negative | 3860279 - 3861292 | 37008.2 |
| pts sugar transporter subunit iib | D5071_17510 | Not Available | Positive | 3861504 - 3861809 | 11235.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
