Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1107 domain-containing protein | D5071_17410 | Not Available | Positive | 3834889 - 3835095 | 8074.16 |
| homoserine o-succinyltransferase | D5071_17415 | Not Available | Positive | 3835373 - 3836302 | 35436.2 |
| malate synthase a | D5071_17420 | Not Available | Positive | 3836586 - 3838184 | 60766.7 |
| isocitrate lyase | D5071_17425 | Not Available | Positive | 3838216 - 3839523 | 47970.5 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | D5071_17430 | Not Available | Positive | 3839573 - 3841300 | 67307.8 |
| acetate operon transcriptional repressor iclr | D5071_17435 | Not Available | Negative | 3841641 - 3842471 | 29630.8 |
| methionine synthase | D5071_17440 | Not Available | Positive | 3842858 - 3846541 | 135628.0 |
| hypothetical protein | D5071_17450 | Not Available | Negative | 3846657 - 3846887 | 8707.51 |
| arac family transcriptional regulator | D5071_17455 | Not Available | Positive | 3847084 - 3848040 | 35923.4 |
| tonb-dependent siderophore receptor | D5071_17460 | Not Available | Positive | 3848232 - 3850337 | 77363.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
