Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | D5071_01170 | Not Available | Positive | 235740 - 237017 | 47860.5 |
| pantetheine-phosphate adenylyltransferase | D5071_01175 | Not Available | Positive | 237057 - 237545 | 17952.8 |
| glycosyltransferase | D5071_01180 | Not Available | Negative | 237551 - 238540 | 37667.0 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | D5071_01185 | Not Available | Negative | 238597 - 239406 | 30274.3 |
| 50s ribosomal protein l33 | D5071_01190 | Not Available | Negative | 239622 - 239789 | 6357.91 |
| 50s ribosomal protein l28 | D5071_01195 | Not Available | Negative | 239801 - 240037 | 8965.01 |
| jab domain-containing protein | D5071_01200 | Not Available | Negative | 240275 - 240940 | 24888.3 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | D5071_01205 | Not Available | Positive | 241127 - 242371 | 44352.4 |
| dutp diphosphatase | D5071_01210 | Not Available | Positive | 242349 - 242807 | 16194.6 |
| nucleoid occlusion factor slma | D5071_01215 | Not Available | Positive | 242936 - 243532 | 23171.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
