Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf350 domain-containing protein | D5071_17305 | Not Available | Positive | 3818031 - 3818429 | 14178.5 |
| biofilm peroxide resistance protein bsma | D5071_17310 | Not Available | Negative | 3818493 - 3818801 | 11266.0 |
| hypothetical protein | D5071_17315 | Not Available | Positive | 3818924 - 3819367 | 16624.8 |
| methyl-accepting chemotaxis protein | D5071_17325 | Not Available | Negative | 3819605 - 3821545 | 70322.3 |
| esterase | D5071_17330 | Not Available | Positive | 3821840 - 3822592 | 27405.5 |
| 30s ribosomal protein s6 | D5071_17335 | Not Available | Positive | 3822774 - 3823166 | 15024.7 |
| primosomal replication protein n | D5071_17340 | Not Available | Positive | 3823172 - 3823492 | 11472.9 |
| 30s ribosomal protein s18 | D5071_17345 | Not Available | Positive | 3823497 - 3823724 | 8957.94 |
| 50s ribosomal protein l9 | D5071_17350 | Not Available | Positive | 3823766 - 3824218 | 15754.9 |
| duf488 family protein | D5071_17355 | Not Available | Positive | 3824348 - 3824710 | 14033.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
