Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein kinase | D5071_17205 | Not Available | Negative | 3796225 - 3797211 | 38708.0 |
| duf1040 family protein | D5071_17210 | Not Available | Negative | 3797290 - 3797559 | 10402.5 |
| molybdenum cofactor guanylyltransferase moba | D5071_17215 | Not Available | Positive | 3797770 - 3798348 | 21006.2 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | D5071_17220 | Not Available | Positive | 3798338 - 3798859 | 19114.1 |
| lysm peptidoglycan-binding domain-containing protein | D5071_17225 | Not Available | Negative | 3799038 - 3800966 | 70687.7 |
| radical sam family heme chaperone hemw | D5071_17230 | Not Available | Negative | 3802521 - 3803657 | 42496.3 |
| xtp/ditp diphosphatase | D5071_17235 | Not Available | Negative | 3803650 - 3804243 | 20964.9 |
| yggu family protein | D5071_17240 | Not Available | Negative | 3804261 - 3804551 | 10607.0 |
| yggt family protein | D5071_17245 | Not Available | Negative | 3804548 - 3805102 | 20850.9 |
| pyrroline-5-carboxylate reductase | D5071_17250 | Not Available | Negative | 3805151 - 3805972 | 28728.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
