Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--ammonia ligase | D5071_17155 | Not Available | Positive | 3783855 - 3785264 | 51729.4 |
| nitrogen regulation protein nr(ii) | D5071_17160 | Not Available | Positive | 3785607 - 3786656 | 38353.9 |
| nitrogen regulation protein nr(i) | D5071_17165 | Not Available | Positive | 3786665 - 3788077 | 52516.2 |
| hypothetical protein | D5071_17170 | Not Available | Negative | 3788607 - 3788855 | 9423.38 |
| oxygen-independent coproporphyrinogen iii oxidase | D5071_17175 | Not Available | Negative | 3788914 - 3790287 | 52380.6 |
| der gtpase-activating protein yihi | D5071_17180 | Not Available | Negative | 3790608 - 3791162 | 20708.4 |
| hypothetical protein | D5071_17185 | Not Available | Negative | 3791173 - 3791364 | 7006.65 |
| yiha family ribosome biogenesis gtp-binding protein | D5071_17190 | Not Available | Positive | 3791366 - 3792001 | 23850.9 |
| dna polymerase i | D5071_17195 | Not Available | Negative | 3792409 - 3795198 | 103032.0 |
| thiol:disulfide interchange protein dsba | D5071_17200 | Not Available | Negative | 3795577 - 3796200 | 23044.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
