Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | D5071_17105 | Not Available | Negative | 3773797 - 3774363 | 20880.6 |
| benzoate transporter bene | D5071_17110 | Not Available | Positive | 3774455 - 3775639 | 41023.1 |
| amino acid abc transporter substrate-binding protein | D5071_17115 | Not Available | Positive | 3775767 - 3776603 | 30235.2 |
| amino acid abc transporter permease | D5071_17120 | Not Available | Positive | 3776702 - 3777445 | 27408.9 |
| amino acid abc transporter permease | D5071_17125 | Not Available | Positive | 3777447 - 3778175 | 26777.6 |
| 6-phosphogluconate phosphatase | D5071_17130 | Not Available | Negative | 3778254 - 3778919 | 25026.2 |
| gnat family n-acetyltransferase | D5071_17135 | Not Available | Negative | 3779292 - 3780233 | 34886.8 |
| d-tyrosyl-trna(tyr) deacylase | D5071_17140 | Not Available | Negative | 3780387 - 3780824 | 15819.9 |
| glucose-1-phosphatase | D5071_17145 | Not Available | Negative | 3780889 - 3781500 | 22815.2 |
| translational gtpase typa | D5071_17150 | Not Available | Negative | 3781662 - 3783485 | 67225.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
