Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygiw/ydei family stress tolerance ob fold protein | D5071_16935 | Not Available | Negative | 3735919 - 3736314 | 14209.7 |
| dna-binding response regulator | D5071_16940 | Not Available | Positive | 3736557 - 3737219 | 24198.3 |
| two-component system sensor histidine kinase qsec | D5071_16945 | Not Available | Positive | 3737216 - 3738574 | 51241.8 |
| low affinity potassium transporter kup | D5071_16950 | Not Available | Negative | 3738717 - 3740585 | 69095.1 |
| atpase rava | D5071_16955 | Not Available | Positive | 3740937 - 3742436 | 57671.3 |
| atpase rava stimulator viaa | D5071_16960 | Not Available | Positive | 3742443 - 3743921 | 56604.3 |
| aspartate--ammonia ligase | D5071_16965 | Not Available | Negative | 3743918 - 3744910 | 37003.3 |
| transcriptional regulator asnc | D5071_16970 | Not Available | Positive | 3745063 - 3745524 | 17188.0 |
| fmn-binding protein mioc | D5071_16975 | Not Available | Positive | 3745614 - 3746057 | 15934.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | D5071_16980 | Not Available | Positive | 3746448 - 3748337 | 70056.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
