Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination regulator recx | D5071_16885 | Not Available | Positive | 3725679 - 3726173 | 19037.2 |
| alanine--trna ligase | D5071_16890 | Not Available | Positive | 3726312 - 3728939 | 96106.6 |
| carbon storage regulator | D5071_16895 | Not Available | Positive | 3729265 - 3729450 | 6839.35 |
| Trna-ser | Not Available | Not Available | Positive | 3729745 - 3729837 | Not Available |
| transcriptional regulator rbsr | D5071_16905 | Not Available | Negative | 3729896 - 3730882 | 36766.4 |
| ribokinase | D5071_16910 | Not Available | Negative | 3730895 - 3731821 | 32514.7 |
| ribose abc transporter substrate-binding protein rbsb | D5071_16915 | Not Available | Negative | 3731893 - 3732780 | 30694.2 |
| ribose abc transporter permease | D5071_16920 | Not Available | Negative | 3732806 - 3733774 | 33419.8 |
| ribose abc transporter atp-binding protein rbsa | D5071_16925 | Not Available | Negative | 3733782 - 3735287 | 55053.1 |
| d-ribose pyranase | D5071_16930 | Not Available | Negative | 3735295 - 3735714 | 15047.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
